Liu CL, Kaplan T, Kim M, et al. Single-nucleosome mapping of histone modifications in S. cerevisiae. PLoS Biol. 2005;3(10):e328. doi:10.1371/journal.pbio.0030328
Zillikens C, Demissie S, Hsu YH, et al. Large meta-analysis of genome-wide association studies identifies five loci for lean body mass. Nat Commun. 2017;8(1):80. doi:10.1038/s41467-017-00031-7
Johns NI, Gomes ALC, Yim SS, et al. Metagenomic mining of regulatory elements enables programmable species-selective gene expression. Nat Methods. 2018;15(5):323-329. doi:10.1038/nmeth.4633
Bernstein BE, Kellis M. Large-scale discovery and validation of functional elements in the human genome. Genome Biol. 2005;6(3):312. doi:10.1186/gb-2005-6-3-312
Hoffman MM, Ernst J, Wilder SP, et al. Integrative annotation of chromatin elements from ENCODE data. Nucleic Acids Res. 2013;41(2):827-41. doi:10.1093/nar/gks1284
Grossman SR, Andersen KG, Shlyakhter I, et al. Identifying recent adaptations in large-scale genomic data. Cell. 2013;152(4):703-13. doi:10.1016/j.cell.2013.01.035
Mendenhall EM, Williamson KE, Reyon D, et al. Locus-specific editing of histone modifications at endogenous enhancers. Nat Biotechnol. 2013;31(12):1133-6. doi:10.1038/nbt.2701
Kheradpour P, Kellis M. Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments. Nucleic Acids Res. 2014;42(5):2976-87. doi:10.1093/nar/gkt1249
Suvà ML, Rheinbay E, Gillespie SM, et al. Reconstructing and reprogramming the tumor-propagating potential of glioblastoma stem-like cells. Cell. 2014;157(3):580-94. doi:10.1016/j.cell.2014.02.030
Gusev A, Lee H, Trynka G, et al. Partitioning heritability of regulatory and cell-type-specific variants across 11 common diseases. Am J Hum Genet. 2014;95(5):535-52. doi:10.1016/j.ajhg.2014.10.004