Biancalani T, Scalia G, Buffoni L, et al. Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram. Nat Methods. 2021;18(11):1352-1362. doi:10.1038/s41592-021-01264-7
Kiapour AM, Cao J, Young M, Capellini TD. The role of Gdf5 regulatory regions in development of hip morphology. PLoS One. 2018;13(11):e0202785. doi:10.1371/journal.pone.0202785
ENCODE Project Consortium, Snyder MP, Gingeras TR, et al. Perspectives on ENCODE. Nature. 2020;583(7818):693-698. doi:10.1038/s41586-020-2449-8
ENCODE Project Consortium, Moore JE, Purcaro MJ, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 2020;583(7818):699-710. doi:10.1038/s41586-020-2493-4
Bernstein BE, Tong JK, Schreiber SL. Genomewide studies of histone deacetylase function in yeast. Proc Natl Acad Sci U S A. 2000;97(25):13708-13. doi:10.1073/pnas.250477697
Brown EJ, Schreiber SL. A signaling pathway to translational control. Cell. 1996;86(4):517-20.
Zhang M, Lykke-Andersen S, Zhu B, et al. Characterising -regulatory variation in the transcriptome of histologically normal and tumour-derived pancreatic tissues. Gut. 2018;67(3):521-533. doi:10.1136/gutjnl-2016-313146
Shooshtari P, Huang H, Cotsapas C. Integrative Genetic and Epigenetic Analysis Uncovers Regulatory Mechanisms of Autoimmune Disease. Am J Hum Genet. 2017;101(1):75-86. doi:10.1016/j.ajhg.2017.06.001
Gate RE, Cheng CS, Aiden AP, et al. Genetic determinants of co-accessible chromatin regions in activated T cells across humans. Nat Genet. 2018;50(8):1140-1150. doi:10.1038/s41588-018-0156-2
Wang X, He L, Goggin SM, et al. High-resolution genome-wide functional dissection of transcriptional regulatory regions and nucleotides in human. Nat Commun. 2018;9(1):5380. doi:10.1038/s41467-018-07746-1