Livny J, Waldor MK. Mining regulatory 5’UTRs from cDNA deep sequencing datasets. Nucleic Acids Res. 2010;38(5):1504-14. doi:10.1093/nar/gkp1121
Livny J. Bioinformatic discovery of bacterial regulatory RNAs using SIPHT. Methods Mol Biol. 2012;905:3-14. doi:10.1007/978-1-61779-949-5_1
Goff LA, Rinn JL. Linking RNA biology to lncRNAs. Genome Res. 2015;25(10):1456-65. doi:10.1101/gr.191122.115