Publications

FGI

Population genetics and microevolution of clinical Candida glabrata reveals recombinant sequence types and hyper-variation within mitochondrial genomes, virulence genes and drug-targets.

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Helmstetter N, Chybowska AD, Delaney C, et al. Population genetics and microevolution of clinical Candida glabrata reveals recombinant sequence types and hyper-variation within mitochondrial genomes, virulence genes and drug-targets. Genetics. 2022. doi:10.1093/genetics/iyac031.

Chromosome-Level Genome Assembly of a Human Fungal Pathogen Reveals Synteny among Geographically Distinct Species.

1.

Voorhies M, Cohen S, Shea TP, et al. Chromosome-Level Genome Assembly of a Human Fungal Pathogen Reveals Synteny among Geographically Distinct Species. mBio. 2022:e0257421. doi:10.1128/mbio.02574-21.

Gene Expression of Diverse Cryptococcus Isolates during Infection of the Human Central Nervous System.

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Yu C-H, Sephton-Clark P, Tenor JL, et al. Gene Expression of Diverse Cryptococcus Isolates during Infection of the Human Central Nervous System. mBio. 2021;12(6):e0231321. doi:10.1128/mBio.02313-21.

Phenotypic Characterization and Comparative Genomics of the Melanin-Producing Yeast Reveals a Distinct Stress Tolerance Profile and Reduced Ribosomal Genetic Content.

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Romsdahl J, Schultzhaus Z, Cuomo CA, et al. Phenotypic Characterization and Comparative Genomics of the Melanin-Producing Yeast Reveals a Distinct Stress Tolerance Profile and Reduced Ribosomal Genetic Content. J Fungi (Basel). 2021;7(12). doi:10.3390/jof7121078.

In vivo emergence of high-level resistance during treatment reveals the first identified mechanism of amphotericin B resistance in Candida auris.

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Rybak JM, Barker KS, Muñoz JF, et al. In vivo emergence of high-level resistance during treatment reveals the first identified mechanism of amphotericin B resistance in Candida auris. Clin Microbiol Infect. 2021. doi:10.1016/j.cmi.2021.11.024.

Diversity, multifaceted evolution, and facultative saprotrophism in the European Batrachochytrium salamandrivorans epidemic.

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Kelly M, Pasmans F, Muñoz JF, et al. Diversity, multifaceted evolution, and facultative saprotrophism in the European Batrachochytrium salamandrivorans epidemic. Nat Commun. 2021;12(1):6688. doi:10.1038/s41467-021-27005-0.

Blastomycosis in Africa and the Middle East: A Comprehensive Review of Reported Cases and Reanalysis of Historical Isolates Based on Molecular Data.

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Schwartz IS, Muñoz JF, Kenyon CR, et al. Blastomycosis in Africa and the Middle East: A Comprehensive Review of Reported Cases and Reanalysis of Historical Isolates Based on Molecular Data. Clin Infect Dis. 2021;73(7):e1560-e1569. doi:10.1093/cid/ciaa1100.

Diagnostic Allele-Specific PCR for the Identification of Clades.

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Carolus H, Jacobs S, Romero CL, et al. Diagnostic Allele-Specific PCR for the Identification of Clades. J Fungi (Basel). 2021;7(9). doi:10.3390/jof7090754.

Whole-genome sequencing of multiple isolates of Puccinia triticina reveals asexual lineages evolving by recurrent mutations.

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Fellers JP, Sakthikumar S, He F, et al. Whole-genome sequencing of multiple isolates of Puccinia triticina reveals asexual lineages evolving by recurrent mutations. G3 (Bethesda). 2021;11(9). doi:10.1093/g3journal/jkab219.

Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic that Includes the Species Complex.

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Geiser DM, Al-Hatmi AMS, Aoki T, et al. Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic that Includes the Species Complex. Phytopathology. 2021;111(7):1064-1079. doi:10.1094/PHYTO-08-20-0330-LE.

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FGI

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