AnnoMate: Exploring and annotating integrated molecular data through custom interactive visualizations.

Patterns (New York, N.Y.)
Authors
Keywords
Abstract

Manual review is an integral part of any study. As the cost of data generation continues to decrease, the rapid rise in large-scale multi-omic studies calls for a modular, flexible framework to perform what is currently a tedious, error-prone process. We developed , a Python-based package built with Plotly Dash that creates interactive, highly customizable dashboards for reviewing and annotating data. Its object-oriented framework enables easy development and modification of custom dashboards for specific manual review tasks. We utilized this framework to implement "reviewer" dashboards for various tasks often performed in cancer genome sequencing studies.

Year of Publication
2024
Journal
Patterns (New York, N.Y.)
Volume
5
Issue
10
Pages
101060
Date Published
10/2024
ISSN
2666-3899
DOI
10.1016/j.patter.2024.101060
PubMed ID
39569208
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