Common variation in fatty acid metabolic genes and risk of incident sudden cardiac arrest.
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Abstract | BACKGROUND: There is limited information on genetic factors associated with sudden cardiac arrest (SCA). OBJECTIVE: To assess the association of common variation in genes in fatty acid pathways with SCA risk. METHODS: We selected 85 candidate genes and 1155 single nucleotide polymorphisms (SNPs) tagging common variation in each gene. We investigated the SNP associations with SCA in a population-based case-control study. Cases (n = 2160) were from a repository of SCA in the greater Seattle area. Controls (n = 2615), frequency-matched on age and sex, were from the same area. We used linear logistic regression to examine SNP associations with SCA. We performed permutation-based p-min tests to account for multiple comparisons within each gene. The SNP associations with a corrected P value of .05 were then examined in a meta-analysis of these SNP associations in 9 replication studies totaling 2129 SCA cases and 23,833 noncases. RESULTS: Eight SNPs in or near 8 genes were associated with SCA risk in the discovery study, one of which was nominally significant in the replication phase (rs7737692, minor allele frequency 36%, near the LPCAT1 gene). For each copy of the minor allele, rs7737692 was associated with 13% lower SCA risk (95% confidence interval -21% to -5%) in the discovery phase and 9% lower SCA risk (95% confidence interval -16% to -1%) in the replication phase. CONCLUSIONS: While none of the associations reached significance with Bonferroni correction, a common genetic variant near LPCAT1, a gene involved in the remodeling of phospholipids, was nominally associated with incident SCA risk. Further study is needed to validate this observation. |
Year of Publication | 2014
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Journal | Heart Rhythm
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Volume | 11
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Issue | 3
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Pages | 471-7
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Date Published | 2014 Mar
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ISSN | 1556-3871
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URL | |
DOI | 10.1016/j.hrthm.2014.01.008
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PubMed ID | 24418166
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PubMed Central ID | PMC3966996
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Grant list | UL1RR025005 / RR / NCRR NIH HHS / United States
CA-34944 / CA / NCI NIH HHS / United States
UL1RR033176 / RR / NCRR NIH HHS / United States
UL1TR000124 / TR / NCATS NIH HHS / United States
HL-34595 / HL / NHLBI NIH HHS / United States
HL-46959 / HL / NHLBI NIH HHS / United States
HL-092111 / HL / NHLBI NIH HHS / United States
HL-26490 / HL / NHLBI NIH HHS / United States
N01-HC-85085 / HC / NHLBI NIH HHS / United States
R01HL59367 / HL / NHLBI NIH HHS / United States
R01 HL105170-01 / HL / NHLBI NIH HHS / United States
CA 97193 / CA / NCI NIH HHS / United States
N02‐HL‐6‐4278 / HL / NHLBI NIH HHS / United States
N01-HC-85081 / HC / NHLBI NIH HHS / United States
R01-HL092111 / HL / NHLBI NIH HHS / United States
HHSN268201100005C / PHS HHS / United States
HL105756 / HL / NHLBI NIH HHS / United States
AG-15928 / AG / NIA NIH HHS / United States
R01-HL088456 / HL / NHLBI NIH HHS / United States
R01 HL088416 / HL / NHLBI NIH HHS / United States
CA-87969 / CA / NCI NIH HHS / United States
HHSN268201100009C / PHS HHS / United States
K24 DK080140 / DK / NIDDK NIH HHS / United States
P30 DK079637 / DK / NIDDK NIH HHS / United States
R01 HL091244 / HL / NHLBI NIH HHS / United States
AG-20098 / AG / NIA NIH HHS / United States
HHSN268200625226C / PHS HHS / United States
CA55075 / CA / NCI NIH HHS / United States
R01 DK078616 / DK / NIDDK NIH HHS / United States
HL087652 / HL / NHLBI NIH HHS / United States
HL-34594 / HL / NHLBI NIH HHS / United States
UL1 TR000124 / TR / NCATS NIH HHS / United States
N01-HC-85086 / HC / NHLBI NIH HHS / United States
HHSN268201100010C / PHS HHS / United States
R01 HL088456 / HL / NHLBI NIH HHS / United States
U01HG004402 / HG / NHGRI NIH HHS / United States
AG-027058 / AG / NIA NIH HHS / United States
K23 DK65978 / DK / NIDDK NIH HHS / United States
CA 40360 / CA / NCI NIH HHS / United States
N01-HC-85082 / HC / NHLBI NIH HHS / United States
P30 DK063491 / DK / NIDDK NIH HHS / United States
N01-HC-35129 / HC / NHLBI NIH HHS / United States
N01 HC-55222 / HC / NHLBI NIH HHS / United States
HHSN268201100008C / PHS HHS / United States
R01HL087641 / HL / NHLBI NIH HHS / United States
N01-HC-85083 / HC / NHLBI NIH HHS / United States
N01-HC-75150 / HC / NHLBI NIH HHS / United States
N01-HC-85080 / HC / NHLBI NIH HHS / United States
N01 HC-15103 / HC / NHLBI NIH HHS / United States
R01 HL088416-03S1 / HL / NHLBI NIH HHS / United States
HHSN268201100007C / PHS HHS / United States
HL-080467 / HL / NHLBI NIH HHS / United States
N01‐HC‐25195 / HC / NHLBI NIH HHS / United States
DK063491 / DK / NIDDK NIH HHS / United States
N01-HC-45133 / HC / NHLBI NIH HHS / United States
N01-HC-85079 / HC / NHLBI NIH HHS / United States
HHSN268201200036C / PHS HHS / United States
HL080295 / HL / NHLBI NIH HHS / United States
T32 AR007175 / AR / NIAMS NIH HHS / United States
HL-35464 / HL / NHLBI NIH HHS / United States
N01-HC-85239 / HC / NHLBI NIH HHS / United States
AG-023629 / AG / NIA NIH HHS / United States
HHSN268201100006C / PHS HHS / United States
R01 HL092144 / HL / NHLBI NIH HHS / United States
R01 HL091069 / HL / NHLBI NIH HHS / United States
N01-HC-85084 / HC / NHLBI NIH HHS / United States
HL-068070 / HL / NHLBI NIH HHS / United States
R01 HL092111 / HL / NHLBI NIH HHS / United States
R01HL086694 / HL / NHLBI NIH HHS / United States
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