Meta-analysis of genome-wide association studies identifies 1q22 as a susceptibility locus for intracerebral hemorrhage.

Am J Hum Genet
Authors
Keywords
Abstract

Intracerebral hemorrhage (ICH) is the stroke subtype with the worst prognosis and has no established acute treatment. ICH is classified as lobar or nonlobar based on the location of ruptured blood vessels within the brain. These different locations also signal different underlying vascular pathologies. Heritability estimates indicate a substantial genetic contribution to risk of ICH in both locations. We report a genome-wide association study of this condition that meta-analyzed data from six studies that enrolled individuals of European ancestry. Case subjects were ascertained by neurologists blinded to genotype data and classified as lobar or nonlobar based on brain computed tomography. ICH-free control subjects were sampled from ambulatory clinics or random digit dialing. Replication of signals identified in the discovery cohort with p 1 × 10(-6) was pursued in an independent multiethnic sample utilizing both direct and genome-wide genotyping. The discovery phase included a case cohort of 1,545 individuals (664 lobar and 881 nonlobar cases) and a control cohort of 1,481 individuals and identified two susceptibility loci: for lobar ICH, chromosomal region 12q21.1 (rs11179580, odds ratio [OR] = 1.56, p = 7.0 × 10(-8)); and for nonlobar ICH, chromosomal region 1q22 (rs2984613, OR = 1.44, p = 1.6 × 10(-8)). The replication included a case cohort of 1,681 individuals (484 lobar and 1,194 nonlobar cases) and a control cohort of 2,261 individuals and corroborated the association for 1q22 (p = 6.5 × 10(-4); meta-analysis p = 2.2 × 10(-10)) but not for 12q21.1 (p = 0.55; meta-analysis p = 2.6 × 10(-5)). These results demonstrate biological heterogeneity across ICH subtypes and highlight the importance of ascertaining ICH cases accordingly.

Year of Publication
2014
Journal
Am J Hum Genet
Volume
94
Issue
4
Pages
511-21
Date Published
2014 Apr 03
ISSN
1537-6605
URL
DOI
10.1016/j.ajhg.2014.02.012
PubMed ID
24656865
PubMed Central ID
PMC3980413
Links
Grant list
K23 NS059774 / NS / NINDS NIH HHS / United States
5K23NS059774 / NS / NINDS NIH HHS / United States
095626 / Wellcome Trust / United Kingdom
R01 NS070941 / NS / NINDS NIH HHS / United States
R01 NS030678 / NS / NINDS NIH HHS / United States
R01 NS062675 / NS / NINDS NIH HHS / United States
T32 NS047996 / NS / NINDS NIH HHS / United States
P50NS061343 / NS / NINDS NIH HHS / United States
R01 HL098065 / HL / NHLBI NIH HHS / United States
NS069763 / NS / NINDS NIH HHS / United States
U10 NS077311 / NS / NINDS NIH HHS / United States
R18 HS017690 / HS / AHRQ HHS / United States
U01 NS069763 / NS / NINDS NIH HHS / United States
R01 NS059727 / NS / NINDS NIH HHS / United States
NS30678 / NS / NINDS NIH HHS / United States
NS36695 / NS / NINDS NIH HHS / United States
U01 NS074425 / NS / NINDS NIH HHS / United States
UL1 TR001425 / TR / NCATS NIH HHS / United States
R01NS059727 / NS / NINDS NIH HHS / United States
R01 NS036695 / NS / NINDS NIH HHS / United States
M01 RR000042 / RR / NCRR NIH HHS / United States
Wellcome Trust / United Kingdom