Probing small-molecule microarrays with tagged proteins in cell lysates.

Curr Protoc Chem Biol
Authors
Keywords
Abstract

The technique of small-molecule microarray (SMM) screening is based on the ability of small molecules to bind to various soluble proteins. This type of interaction is easily detected by the presence of a fluorescence signal produced by labeled antibodies that specifically recognize a unique sequence (tag) present on the target protein. The fluorescent signal intensity values are determined based on signal-to-noise ratios (SNRs). SMM screening is a high-throughput, unbiased method that can rapidly identify novel direct ligands for various protein targets. This binding-based assay format is generally applicable to most proteins, but it is especially useful for protein targets that do not possess an enzymatic activity. SMMs enable screening a protein in a purified form or in the context of a cellular lysate, likely providing a more physiologically relevant screening environment.

Year of Publication
2014
Journal
Curr Protoc Chem Biol
Volume
6
Issue
4
Pages
209-20
Date Published
2014 Dec 01
ISSN
2160-4762
DOI
10.1002/9780470559277.ch140101
PubMed ID
25445177
PubMed Central ID
PMC4266996
Links
Grant list
R01 CA160860 / CA / NCI NIH HHS / United States
CA160860 / CA / NCI NIH HHS / United States