A rare coding allele in is protective for psoriatic arthritis.

Ann Rheum Dis
Authors
Keywords
Abstract

OBJECTIVES: Psoriatic arthritis (PsA) is an inflammatory arthritis associated with psoriasis. While many common risk alleles have been reported for association with PsA as well as psoriasis, few rare coding alleles have yet been identified.

METHODS: To identify rare coding variation associated with PsA risk or protection, we genotyped 41 267 variants with the exome chip and investigated association within an initial cohort of 1980 PsA cases and 5913 controls. Genotype data for an independent cohort of 2234 PsA cases and 5708 controls was also made available, allowing for a meta-analysis to be performed with the discovery dataset.

RESULTS: We identified an association with the rare variant rs35667974 (p=2.39x10, OR=0.47), encoding an Ile923Val amino acid change in the gene protein product. The association was reproduced in our independent cohort, which reached a high level of significance on meta-analysis with the discovery and replication datasets (p=4.67x10). We identified a strong association with when performing multiple-variant analysis (p=6.77x10), and found evidence of independent effects between the rare allele and the common PsA variant at the same locus.

CONCLUSION: For the first time, we report a rare coding allele in to be protective for PsA. This rare allele has also been identified to have the same direction of effect on type I diabetes and psoriasis. While this association further supports existing evidence for as a causal gene for PsA, mechanistic studies will need to be pursued to confirm that is indeed causal.

Year of Publication
2017
Journal
Ann Rheum Dis
Volume
76
Issue
7
Pages
1321-1324
Date Published
2017 Jul
ISSN
1468-2060
DOI
10.1136/annrheumdis-2016-210592
PubMed ID
28501801
PubMed Central ID
PMC5530346
Links
Grant list
R01 AR042742 / AR / NIAMS NIH HHS / United States
U01 GM092691 / GM / NIGMS NIH HHS / United States
R01 AR050511 / AR / NIAMS NIH HHS / United States
R01 AR063759 / AR / NIAMS NIH HHS / United States
R01 AR065183 / AR / NIAMS NIH HHS / United States
R01 AR063611 / AR / NIAMS NIH HHS / United States