Genome-wide association studies in the Japanese population identify seven novel loci for type 2 diabetes.

Nat Commun
Authors
Keywords
Abstract

Genome-wide association studies (GWAS) have identified more than 80 susceptibility loci for type 2 diabetes (T2D), but most of its heritability still remains to be elucidated. In this study, we conducted a meta-analysis of GWAS for T2D in the Japanese population. Combined data from discovery and subsequent validation analyses (23,399 T2D cases and 31,722 controls) identify 7 new loci with genome-wide significance (P5 × 10(-8)), rs1116357 near CCDC85A, rs147538848 in FAM60A, rs1575972 near DMRTA1, rs9309245 near ASB3, rs67156297 near ATP8B2, rs7107784 near MIR4686 and rs67839313 near INAFM2. Of these, the association of 4 loci with T2D is replicated in multi-ethnic populations other than Japanese (up to 65,936 T2Ds and 158,030 controls, P0.007). These results indicate that expansion of single ethnic GWAS is still useful to identify novel susceptibility loci to complex traits not only for ethnicity-specific loci but also for common loci across different ethnicities.

Year of Publication
2016
Journal
Nat Commun
Volume
7
Pages
10531
Date Published
2016 Jan 28
ISSN
2041-1723
URL
DOI
10.1038/ncomms10531
PubMed ID
26818947
PubMed Central ID
PMC4738362
Links
Grant list
R01CA64277 / CA / NCI NIH HHS / United States
BC050791 / BC / NCI NIH HHS / United States
R37 CA070867 / CA / NCI NIH HHS / United States
SP/09/002 / British Heart Foundation / United Kingdom
KO1TW006087 / TW / FIC NIH HHS / United States
R01 DK082766 / DK / NIDDK NIH HHS / United States
R01 CA064277 / CA / NCI NIH HHS / United States
R01 CA124558 / CA / NCI NIH HHS / United States
268834 / European Research Council / International
R37CA070867 / CA / NCI NIH HHS / United States
UL1 RR024975 / RR / NCRR NIH HHS / United States
R01DK082766 / DK / NIDDK NIH HHS / United States
G0800270 / Medical Research Council / United Kingdom
R01CA124558 / CA / NCI NIH HHS / United States
UM1 CA182910 / CA / NCI NIH HHS / United States
K01 TW006087 / TW / FIC NIH HHS / United States