Radman-Livaja M, Liu CL, Friedman N, Schreiber SL, Rando OJ. Replication and active demethylation represent partially overlapping mechanisms for erasure of H3K4me3 in budding yeast. PLoS Genet. 2010;6(2):e1000837. doi:10.1371/journal.pgen.1000837
Muñoz JF, Gade L, Chow NA, et al. Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species. Nat Commun. 2018;9(1):5346. doi:10.1038/s41467-018-07779-6
Dukik K, Muñoz JF, Jiang Y, et al. Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales). Mycoses. 2017;60(5):296-309. doi:10.1111/myc.12601
Ene IV, Farrer RA, Hirakawa MP, Agwamba K, Cuomo CA, Bennett RJ. Global analysis of mutations driving microevolution of a heterozygous diploid fungal pathogen. Proc Natl Acad Sci U S A. 2018;115(37):E8688-E8697. doi:10.1073/pnas.1806002115
Cuomo CA, Shea T, Yang B, Rao R, Forche A. Whole Genome Sequence of the Heterozygous Clinical Isolate 81-B-5. G3 (Bethesda). 2017;7(9):2883-2889. doi:10.1534/g3.117.043547
Pasolli E, Schiffer L, Manghi P, et al. Accessible, curated metagenomic data through ExperimentHub. Nat Methods. 2017;14(11):1023-1024. doi:10.1038/nmeth.4468
Rhodes J, Desjardins CA, Sykes SM, et al. Tracing Genetic Exchange and Biogeography of var. at the Global Population Level. Genetics. 2017;207(1):327-346. doi:10.1534/genetics.117.203836
Muñoz JF, McEwen JG, Clay OK, Cuomo CA. Genome analysis reveals evolutionary mechanisms of adaptation in systemic dimorphic fungi. Sci Rep. 2018;8(1):4473. doi:10.1038/s41598-018-22816-6
Mancera E, Porman AM, Cuomo CA, Bennett RJ, Johnson AD. Finding a Missing Gene: EFG1 Regulates Morphogenesis in Candida tropicalis. G3 (Bethesda). 2015;5(5):849-56. doi:10.1534/g3.115.017566
Passer AR, Coelho MA, Billmyre RB, et al. Genetic and Genomic Analyses Reveal Boundaries between Species Closely Related to Pathogens. mBio. 2019;10(3). doi:10.1128/mBio.00764-19