Afik S, Yates KB, Bi K, et al. Targeted reconstruction of T cell receptor sequence from single cell RNA-seq links CDR3 length to T cell differentiation state. Nucleic Acids Res. 2017;45(16):e148. doi:10.1093/nar/gkx615
Fonseka CY, Rao DA, Raychaudhuri S. Leveraging blood and tissue CD4+ T cell heterogeneity at the single cell level to identify mechanisms of disease in rheumatoid arthritis. Curr Opin Immunol. 2017;49:27-36. doi:10.1016/j.coi.2017.08.005
Clark AR, Greka A. The power of one: advances in single-cell genomics in the kidney. Nat Rev Nephrol. 2020;16(2):73-74. doi:10.1038/s41581-019-0237-1
Shalek AK, Benson M. Single-cell analyses to tailor treatments. Sci Transl Med. 2017;9(408). doi:10.1126/scitranslmed.aan4730
Haber AL, Biton M, Rogel N, et al. A single-cell survey of the small intestinal epithelium. Nature. 2017;551(7680):333-339. doi:10.1038/nature24489
da Rocha EL, Rowe G, Lundin V, et al. Reconstruction of complex single-cell trajectories using CellRouter. Nat Commun. 2018;9(1):892. doi:10.1038/s41467-018-03214-y
Nirschl CJ, Suárez-Fariñas M, Izar B, et al. IFNγ-Dependent Tissue-Immune Homeostasis Is Co-opted in the Tumor Microenvironment. Cell. 2017;170(1):127-141.e15. doi:10.1016/j.cell.2017.06.016
Slowikowski K, Wei K, Brenner MB, Raychaudhuri S. Functional genomics of stromal cells in chronic inflammatory diseases. Curr Opin Rheumatol. 2018;30(1):65-71. doi:10.1097/BOR.0000000000000455
Pandey S, Shekhar K, Regev A, Schier AF. Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq. Curr Biol. 2018;28(7):1052-1065.e7. doi:10.1016/j.cub.2018.02.040
Wang C, Singer M, Anderson AC. Molecular Dissection of CD8 T-Cell Dysfunction. Trends Immunol. 2017;38(8):567-576. doi:10.1016/j.it.2017.05.008