Mehta RS, Abu-Ali GS, Drew DA, et al. Stability of the human faecal microbiome in a cohort of adult men. Nat Microbiol. 2018;3(3):347-355. doi:10.1038/s41564-017-0096-0
Amir A, Zeisel A, Zuk O, et al. High-resolution microbial community reconstruction by integrating short reads from multiple 16S rRNA regions. Nucleic Acids Res. 2013;41(22):e205. doi:10.1093/nar/gkt1070
Anahtar MN, Byrne EH, Doherty KE, et al. Cervicovaginal bacteria are a major modulator of host inflammatory responses in the female genital tract. Immunity. 2015;42(5):965-76. doi:10.1016/j.immuni.2015.04.019
Kim HJ, Li H, Collins JJ, Ingber DE. Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip. Proc Natl Acad Sci U S A. 2016;113(1):E7-15. doi:10.1073/pnas.1522193112
Morgan XC, Huttenhower C. Meta’omic analytic techniques for studying the intestinal microbiome. Gastroenterology. 2014;146(6):1437-1448.e1. doi:10.1053/j.gastro.2014.01.049
Karr JR, Williams AH, Zucker JD, et al. Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models. PLoS Comput Biol. 2015;11(5):e1004096. doi:10.1371/journal.pcbi.1004096
Lander ES. The Heroes of CRISPR. Cell. 2016;164(1-2):18-28. doi:10.1016/j.cell.2015.12.041
MacCallum I, Przybylski D, Gnerre S, et al. ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads. Genome Biol. 2009;10(10):R103. doi:10.1186/gb-2009-10-10-r103
Solomon KV, Haitjema CH, Thompson DA, O’Malley MA. Extracting data from the muck: deriving biological insight from complex microbial communities and non-model organisms with next generation sequencing. Curr Opin Biotechnol. 2014;28:103-10. doi:10.1016/j.copbio.2014.01.007
Lander ES. Brave New Genome. N Engl J Med. 2015;373(1):5-8. doi:10.1056/NEJMp1506446