Label-Free Sample Preparation for Single-Cell Proteomics.
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Abstract | In recent years, single-cell proteomics (SCP) has become a valuable addition to other single-cell omics technologies for studying cellular heterogeneity. The amount of protein in a single cell is very limited, and in contrast to sequencing techniques, there are currently no means for protein amplification. Therefore, most single-cell proteomics approaches aim to maximize sample preparation efficiency while minimizing peptide loss. By reducing processing volumes to sub-microliters and avoiding manual transfer steps that could lead to peptide loss, peptide recovery, and the robustness of SCP workflows have been significantly improved. In this chapter, we describe a protocol for label-free SCP sample preparation using the cellenONE platform and the proteoCHIP LF 48 substrate prior to analysis with high-performance liquid chromatography-mass spectrometry. |
Year of Publication | 2024
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Journal | Methods in molecular biology (Clifton, N.J.)
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Volume | 2817
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Pages | 1-7
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Date Published | 12/2024
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ISSN | 1940-6029
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DOI | 10.1007/978-1-0716-3934-4_1
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PubMed ID | 38907142
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