Publications

Corticosteroid-regulated gene transcription in SH-SY5Y-derived neurons: Insights into the mineralocorticoid and glucocorticoid receptor-mediated response.

Lugenbühl JF, Snijders C, Pernia CD, Estruch MS, Kenis G, Daskalakis NP. Corticosteroid-regulated gene transcription in SH-SY5Y-derived neurons: Insights into the mineralocorticoid and glucocorticoid receptor-mediated response. Journal of neuroendocrinology. 2025:e70021. doi:10.1111/jne.70021

Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods.

Tercan B, Apolonio VH, Chagas VS, et al. Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods. STAR protocols. 2025;6(2):103681. doi:10.1016/j.xpro.2025.103681

Clonal Hematopoiesis of Indeterminate Potential and Incident Hypertension: Results From the Women's Health Initiative.

Haring B, Aragaki AK, Shimbo D, et al. Clonal Hematopoiesis of Indeterminate Potential and Incident Hypertension: Results From the Women’s Health Initiative. Hypertension (Dallas, Tex. : 1979). 2025;82(4):e70-e72. doi:10.1161/HYPERTENSIONAHA.124.24482

Affinity selection-mass spectrometry with linearizable macrocyclic peptide libraries.

Lee MA, Brown JS, Farquhar CE, Loas A, Pentelute BL. Affinity selection-mass spectrometry with linearizable macrocyclic peptide libraries. Science advances. 2025;11(12):eadr1018. doi:10.1126/sciadv.adr1018

Genome-wide CRISPR screen identifies IRF1 and TFAP4 as transcriptional regulators of Galectin-9 in T cell acute lymphoblastic leukemia.

Wiggers CRM, Yüzügüldü B, Tadros NG, et al. Genome-wide CRISPR screen identifies IRF1 and TFAP4 as transcriptional regulators of Galectin-9 in T cell acute lymphoblastic leukemia. Science advances. 2025;11(12):eads8351. doi:10.1126/sciadv.ads8351

Consequences of training data composition for deep learning models in single-cell biology.

Nadig A, Thoutam A, Hughes M, et al. Consequences of training data composition for deep learning models in single-cell biology. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.02.19.639127

DNA origami vaccines program antigen-focused germinal centers.

Romanov A, Knappe GA, Ronsard L, et al. DNA origami vaccines program antigen-focused germinal centers. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.02.21.639354

Trajectories of microbiome-derived bile acids in early life - insights into the progression to islet autoimmunity.

Lamichhane S, Dickens AM, Buchacher T, et al. Trajectories of microbiome-derived bile acids in early life - insights into the progression to islet autoimmunity. medRxiv : the preprint server for health sciences. 2025. doi:10.1101/2025.02.18.25322275

Genetic subtyping of obesity reveals biological insights into the uncoupling of adiposity from its cardiometabolic comorbidities.

Chami N, Wang Z, Svenstrup V, et al. Genetic subtyping of obesity reveals biological insights into the uncoupling of adiposity from its cardiometabolic comorbidities. medRxiv : the preprint server for health sciences. 2025. doi:10.1101/2025.02.25.25322830

Consequences of training data composition for deep learning models in single-cell biology.

Nadig A, Thoutam A, Hughes M, et al. Consequences of training data composition for deep learning models in single-cell biology. bioRxiv : the preprint server for biology. 2025. doi:10.1101/2025.02.19.639127

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Publications

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