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Stanley Center Publications

Below are selected publications related to key areas of interest to Stanley Center investigators, including: Commentary, Genetics, Neurobiology, and Clinical Research.

Commentary

Hyman, S. E. (2021). . Biological Psychiatry. 89(1), 8-10. 

Hyman S. E. (2021). . Current opinion in genetics & development, 68, 99–105. 

Hyman S. E. (2021). . Perspectives in biology and medicine, 64(1), 6–28.

Pintacuda, G., Martín, J. M., and Eggan, K. C. (2021). . Molecular autism 12 (1), 10. 

Turley, P., Meyer, M., N., Wang, N., Cesarini, D., Hammonds, E., Martin, A., R., Neale, B., M., Rehm, H., L., Wilkins-Haug, L., Benjamin, D. J., Hyman, S. E., Laibson, D., and Visscher, P. M. (2021). . The New England journal of medicine 385 (1), 78–86. 

Aida, T., Feng G. (2020). . Current Opinion Genetic Development 65, 160-168. 

Feng, G., Jensen, F. E., Greely, H. T., Okano, H., Treue, S., Roberts, A. C., Fox, J. G., Caddick, S., Poo, M. M., Newsome, W. T., Morrison, J. H. (2020). . Proceedings of the National Acadamies of Science. 

Nehme, R., Barrett, L.E. (2020)  Molecular Austism 11:21

Velasco S, Paulsen B, Arlotta P. . Annu Rev Neurosci. 2020 Jul 8;43:375-389.  

Liddelow SA, Marsh SE, Stevens B. Trends Immunol. 2020 Sep;41(9):820-835.

Martin, A.R., Daly, M.J., Robinson, E.B., Hyman, S.E., Neale, B.M. (2019) Biol Psychiatry 86:97-109

Martin, A.R., Kanai, M., Kamatani, Y., Okada, Y., Neale, B.M., and Daly, M.J. (2019) Nature Genetics 51, 584–591

Wilton, D.K., Dissing-Olesen, L., Stevens, B. (2019) Annu Rev Neurosci 42:107-127

Hyman, S.E. (2018) Philosophical Transactions of the Royal Society B: Biological Sciences 373, 20170031

Farahany, N.A., Greely, H.T., Hyman, S., Koch, C., Grady, C., Pașca, S.P., Sestan, N., Arlotta, P., Bernat, J.L., Ting, J., et al (2018) Nature 556, 429–432

Kaiser, T., and Feng, G. (2015) Nature Medicine 21, 979–988

Genetics

Atkinson, E. G., Maihofer, A. X., Kanai, M., Martin, A. R., Karczewski, K. J., Santoro, M. L., Ulirsch, J. C., Kamatani, Y., Okada, Y., Finucane, H. K., Koenen, K. C., Nievergelt, C. M., Daly, M. J., Neale, B. M. (2021). Nature Genetics. 53, 195–204.

Bigdeli, T. B., Genovese, G., Georgakopoulos, .P, Meyers, J. L., Peterson, R. E., Iyegbe, C. O., Medeiros, H., Valderrama, J., Achtyes, E. D., Kotov, R., Stahl, E. A., Abbott, C., Azevedo, M. H., Belliveau, R. A., Bevilacqua, E., Bromet, E. J., Byerley, W., Carvalho, C. B., Chapman, S. B., DeLisi, L. E., Dumont ,A. L., O'Dushlaine, C., Evgrafov, O. V., Fochtmann, L. J., Gage, D., Kennedy, J. L., Kinkead, B., Macedo, A., Moran, J. L., Morley, C. P., Dewan, M. J., Nemesh, J., Perkins, D. O., Purcell, S. M., Rakofsky, J. J., Scolnick, E. M., Sklar, B. M., Sklar, P., Smoller, J. W., Sullivan, P. F., Macciardi, F., Marder, S. R., Gur, R. C., Gur, R. E., Braff, D. L.; Consortium on the Genetics of Schizophrenia (COGS), Investigators, Nicolini, H., Escamilla, M. A., Vawter, M. P., Sobell, J. L., Malaspina, D., Lehrer, D. S., Buckley, P. F., Rapaport, M. H., Knowles, J. A.; Genomic Psychiatry Cohort (GPC) Consortium, Fanous, A. H., Pato, M. T., McCarroll, S. A., Pato, C. N. (2020). . Molecular Psychiatry 25(10), 2455-2467.

Demontis, D., Walters, R., Martin, J., Mattheisen, M., Als, T., Agerbo, E., Baldursson, G., Belliveau, R., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Cerrato, F., Chambert, K., Churchhouse, C., Dumont, A., Eriksson, N., Gandal, M., Goldstein, J. , Grasby, K., Grove, J., Gudmundsson, O. O., Hansen, C. S., Hauberg, M. E., Hollegaard, M. V., Howrigan, D. P., Huang, H., Maller, J. B., Martin, A. R., Martin, N., Moran, J., Pallesen, J., Palmer, D., Pedersen, C., Pedersen, M., Poterba, T., Poulsen, J., Ripke, S., Robinson, E., Satterstrom, F., Stefansson, H., Stevens, C., Turley, P., Walters, G., Won, H., Wright, M.; ADHD Working Group of the Psychiatric Genomics Consortium (PGC); Early Lifecourse & Genetic Epidemiology (EAGLE) Consortium; 23andMe Research Team, et al. (2019). . Nat Genet 51,63-75.

Feng, Y-CA, Howrigan, D., Abbott, L., Tashman, K., Cerrato, F., Singh, T., Heyne, H., Byrnes, A., Churchhouse, C., Watts, N., et al. (2019). . American Journal of Human Genetics 105, 267–282.

Finucane, H., Reshef, Y., Anttila, V., Slowikowski, K., Gusev, A., Byrnes, A., Gazal, S., Loh, P., Lareau, C., Shoresh, N., Genovese, G., Saunders, A., Macosko, E., Pollack, S.; Brainstorm Consortium, Perry, J., Buenrostro, J., Bernstein, B., Raychaudhuri, S., McCarroll, S., Neale, B., Price, A. (2018) . Nat Genet 50, 621-629.

Grove, J., Ripke, S., Als, T., Mattheisen, M., Walters, R., Won, H., Pallesen, J., Agerbo, E., Andreassen, O, Anney, R., Awashti, S., Belliveau, R., Bettella, F., Buxbaum, J., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Cerrato, F., Chambert, K., Christensen, J., Churchhouse, C., Dellenvall, K., Demontis, D., De Rubeis, S., Devlin, B., Djurovic, S., Dumont, A. L., Goldstein, J. I., Hansen, C. S., Hauberg, M., Hollegaard, M., Hope, S., Howrigan, D., Huang, H., Hultman, C., Klei, L., Maller, J., Martin,J., Martin, A.  Moran, J., Nyegaard, M., Nærland, T., Palmer, D., Palotie, A., Pedersen, C., Pedersen, M., Poterba, T., Poulsen, J., Pourcain, B., Qvist, P., Rehnström, K., Reichenberg, A., Reichert, J., Robinson, E., Roeder, K., Roussos, P., Saemundsen, E., Sandin, S., Satterstrom, F., Davey Smith, G., Stefansson, H., Steinberg, S., Stevens, C., Sullivan, P., Turley, P., Walters, G., Xu, X.; Autism Spectrum Disorder Working Group of the Psychiatric Genomics Consortium; et al. (2019). . Nat Genet 51,431-444.

Hess, J. L., Tylee, D. S., Mattheisen, M., Schizophrenia Working Group of the Psychiatric Genomics Consortium, Lundbeck Foundation Initiative for Integrative Psychiatric Research (iPSYCH), Børglum, A. D., Als, T. D., Grove, J., Werge, T., Mortensen, P. B., Mors, O., Nordentoft, M., Hougaard, D. M., Byberg-Grauholm, J., Bækvad-Hansen, M., Greenwood, T. A., Tsuang, M. T., Curtis, D., Steinberg, S., Sigurdsson, E., … Glatt, S. J. (2021). . Molecular psychiatry, 26(3), 800–815. 

Howrigan, D., Rose, S., Samocha, K., Fromer, M., Cerrato, F., Chen,W., Churchhouse, C., Chambert, K., Chandler, S., Daly, M., Dumont, A., Genovese, G., Hwu, H., Laird, N., Kosmicki, J., Moran, J., Roe, C., Singh,T., Wang, S., Faraone, S., Glatt, S., McCarroll, S. , Tsuang, M., Neale, B. (2020). . Nat Neurosci 23:185-193.

Kamitaki N, Sekar A, Handsaker RE, de Rivera H, Tooley K, Morris DL, Taylor KE, Whelan CW, Tombleson P, Loohuis LMO; Schizophrenia Working Group of the Psychiatric Genomics Consortium, Boehnke M, Kimberly RP, Kaufman KM, Harley JB, Langefeld CD, Seidman CE, Pato MT, Pato CN, Ophoff RA, Graham RR, Criswell LA, Vyse TJ, McCarroll SA. (2020) . Nature. 582:577-581

Lam, M., Chen, C., Li, Z., Martin, A., Bryois, J., Ma, X., Gaspar, H., Ikeda, M., Benyamin, B., Brown, B., Liu, R., Zhou, W., Guan, L., Kamatani, Y., Kim, S., Kubo, M., Kusumawardhani, A., Liu, C, Ma, H., Periyasamy, S., Takahashi, A., Xu, Z., Yu, H., Zhu, F.; Schizophrenia Working Group of the Psychiatric Genomics Consortium; et al. (2019). , Nat Genet 51,1670-1678.

Loh, P. R., Genovese, G., McCarroll, S. A. (2020). . Nature 584(7819), 136-141.  

Martin, A. R., Atkinson, E. G., Chapman, S. B., Stevenson, A., Stroud, R. E., Abebe, T., Akena, D., Alemayehu, M., Ashaba, F. K., Atwoli, L., Bowers, T., Chibnik, L. B., Daly, M. J., DeSmet, T., Dodge, S., Fekadu, A., Ferriera, S., Gelaye, B., Gichuru, S., Injera, W. E., … NeuroGAP-Psychosis Study Team (2021). . American journal of human genetics, 108(4), 656–668. 

Martin, A. R., Gignoux, C. R., Walters, R. K., Wojcik, G. L., Neale, B. M., Gravel, S., Daly, M. J., Bustamante, C. D., Kenny, E. E. (2020). . American Journal of Human Genetics 107(4), 788-789. 

Mullins, N., & Huang, H. (2021). . JAMA psychiatry, 78(3), 248–249. 

Nievergelt, C., Maihofer, A., Klengel, T., Atkinson, E., Chen, C., Choi, K., Coleman, J., Dalvie, S., Duncan, L., Gelernter, J., Levey, D., Logue, M., Polimanti, R., Provost, A., Ratanatharathorn, A., Stein, M., Torres, K., et al. (2019). . Nat Commun 10, 4558.

Palmer, D.S., Howrigan, D.P., Chapman, S.B. et al. . Nat Genet 54, 541–547 (2022). 

Peterson, R., Kuchenbaecker, K., Walters, R., Chen, C., Popejoy, A., Periyasamy, S., Lam, M., Iyegbe, C., Strawbridge, R., Brick, L., Carey, C.E., Martin, A.R., et al. (2019). . Cell 179, 589–603.

Saarentaus, E. C., Havulinna, A. S., Mars, N., Ahola-Olli, A., Kiiskinen, T., Partanen, J., Ruotsalainen, S., Kurki, M., Urpa, L. M., Chen, L., Perola, M., Salomaa, V., Veijola, J., Männikkö, M., Hall, I. M., Pietiläinen, O., Kaprio, J., Ripatti, S., Daly, M., & Palotie, A. (2021).. Molecular psychiatry, Advance online publication. 

Wang, Q. S., Kelley, D. R., Ulirsch, J., Kanai, M., Sadhuka, S., Cui, R., Albors, C., Cheng, N., Okada, Y., Biobank Japan Project, Aguet, F., Ardlie, K. G., MacArthur, D. G., & Finucane, H. K. (2021). Leveraging supervised learning for functionally informed fine-mapping of cis-eQTLs identifies an additional 20,913 putative causal eQTLs. Nature communications, 12(1), 3394.

Satterstrom, F., Kosmicki, J., Wang, J., Breen, M., De Rubeis, S., An, J., Peng, M., Collins, R., Grove, J., Klei, L., Stevens, C., Reichert, J., Mulhern, M., Artomov, M., Gerges, S., Sheppard, B., Xu, X., Bhaduri, A., Norman, U., Brand, H., Schwartz, G., Nguyen, R., Guerrero, E., Dias, C.; Autism Sequencing Consortium; iPSYCH-ӳ����ý Consortium, Betancur, C., Cook, E., Gallagher, L., Gill, M., Sutcliffe, J., Thurm, A., Zwick, M., Børglum, A., State, M., Cicek, A., Talkowski, M., Cutler, D., Devlin, B., Sanders, S., Roeder, K., Daly, M., Buxbaum, J. (2020). . Cell 180:568-584.

Satterstrom, F., Walters, R., Singh, T., Wigdor, E., Lescai, F., Demontis, D., Kosmicki, J., Grove, J., Stevens, C., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Palmer, D., Maller, J.; iPSYCH-ӳ����ý Consortium, Nordentoft, M., Mors, O., Robinson, E. , Hougaard, D., Werge, T., Bo Mortensen, P., Neale, B., Børglum, A., Daly, M. (2019). . Nat Neurosci 22,1961-1965.

Singh, T., Poterba, T., Curtis, D. et al. . Nature 604, 509–516 (2022). 

Stahl, E., Breen, G., Forstner, A., McQuillin, A., Ripke, S., Trubetskoy, V., Mattheisen, M., Wang, Y., Coleman, J., Gaspar, H., de Leeuw, C., Steinberg, S., Pavlides, J., Trzaskowski, M., Byrne, E., Pers, T., Holmans, P., Richards, A., et al, (2019). . Nat Genet 51, 793-803.

Stevenson, A., Akena, D., Stroud, R., Atwoli, L., Campbell, M., Chibnik, L., Kwobah, E., Kariuki, S., Martin, A., de Menil, V., Newton, C., Sibeko, G., Stein, D., Teferra, S., Zingela, Z., Koenen, K. (2019). BMJ Open 9:e025469

Taylor, J., Debost, J., Morton, S., Wigdor, E., Heyne, H., Lal, D., Howrigan, D., Bloemendal, A., Larsen, J., Kosmicki, J., Weiner, D., Homsy, J., Seidman, J., Seidman, C., Agerbo, E., McGrath, J., Mortensen, P., Petersen, L., Daly, M., Robinson, E. B. (2019). . Nature Communications 10, 3043.

Thyme, S., Pieper, L, Li, E., Pandey, S., Wang, Y., Morris, N., Sha, C., Choi, J., Herrera, K., Soucy, E., Zimmerman, S., Randlett, O., Greenwood, J., McCarroll, S., Schier, A. (2019). . Cell 177, 478-491

Yu, D., Sul, J., Tsetsos, F., Nawaz, M., Huang, A., Zelaya, I., Illmann, C., Osiecki, L., Darrow, S., Hirschtritt, M., et al. (2019). . American Journal of Psychiatry 176, 217–227.

Selected preprints:

Carey, C., Huang, Y., Strong, R., Aslibekyan, S., Gentleman, R., Smoller, J., Wilmer, J., Robinson, E., Germine, L. (2020). . bioRxiv 2020.09.16.297408.

Lam, M., Thompson, M., Li, B., Edwards, A. C., Chen, C.-Y., Ge, T., Cai, N., Bigdeli, T., Lencz, T., Kendler, K., Huang, H. (2020). . medRxiv 2020.09.14.20193870.

Martin, A. R., Atkinson, E. G., Chapman, S. B., Stevenson, A., Stroud, R. E., Abebe, T., Akena, D., Alemayehu, M., Ashaba, F. K., Atwoli, L., Bowers, T., Chibnik, L. B., Daly, M. J., DeSmet, T., Dodge, S., Fekadu, A., Ferriera, S., Gelaye, B., … Gichuru, S. (2020). . bioRxiv 2020.04.27.064832.

Mullins, N., Forstner, A. J., O’Connell, K. S., Coombes, B., Coleman, J. R. I., Qiao, Z., Als, T. D., Bigdeli, T. B., Børte, S., Bryois, J., Charney, A. W., Drange, O. K., Gandal, M. J., Hagenaars, S. P., Ikeda, M., Kamitaki, N., Kim, M., Krebs, K., … Panagiotaropoulou, G. (2020). . medRxiv 2020.09.17.20187054.

Schizophrenia Working Group of the Psychiatric Genomics Consortium, Ripke, S., Walters, J.TR., O'Donovan, M.C. (2020). . medRxiv 2020.09.12.20192922.

Singh, T., Poterba, T., Curtis, D., Akil, H., Al Eissa, M., Barchas, J. D., Bass, N., Bigdeli, T. B., Breen, G., Bromet, E. J., Buckley, P. F., Bunney, W. E., Bybjerg-Grauholm, J., Byerley, W. F., Chapman, S. B., Chen, W. J., Churchhouse, C., Craddock, N., Curtis, C., … Daly, M. J. (2020). . medRxiv 2020.09.18.20192815.

Wang, Q. S., Kelley, D. R., Ulirsch, J., Kanai, M., Sadhuka, S., Cui, R., Albors, C., Cheng, N., Okada, Y., Aguet, F., Ardlie, K. G., MacArthur, D. G., and Finucane, H. K. (2020). . bioRxiv 2020.10.20.347294.

Neurobiology

Tools and technologies:

Adam, Y., Kim, J., Lou, S., Zhao, Y., Brinks, D., Wu, H., Mostajo-Radji, M., Kheifets, S.,Parot, V.,Chettih, S.,Williams, K., Farhi, S., Madisen, L.,  Harvey, C., Zeng, H., Arlotta, P., Campbell, R.,  Cohen, A. (2019). . Nature 569, 413-417.

Albanese, A., Swaney, J. M., Yun, D. H., Evans, N. B., Antonucci, J. M., Velasco, S., Sohn, C. H., Arlotta, P., Gehrke, L., Chung, K. (2020). . Scientific Reports. 10(1):21487. 

Amamoto R, Zuccaro E, Curry NC, Khurana S, Chen HH, Cepko CL, Arlotta P. . Nucleic Acids Res. 2020 Jan 10;48(1):e4. 

Cable, D. M., Murray, E., Zou, L. S., Goeva, A., Macosko, E. Z., Chen, F., & Irizarry, R. A. (2021). . Nature biotechnology, Advance online publication. 

Di Bella, D. J., Habibi, E., Stickels, R. R., Scalia, G., Brown, J., Yadollahpour, P., Yang, S. M., Abbate, C., Biancalani, T., Macosko, E. Z., Chen, F., Regev, A., & Arlotta, P. (2021). . Nature, Advance online publication. 

Eid, F. E., Elmarakeby, H. A., Chan, Y. A., Fornelos, N., ElHefnawi, M., Van Allen, E. M., Heath, L. S., & Lage, K. (2021). . Communications biology, 4(1), 183. 

Hammond, T., Dufort, C., Dissing-Olesen, L., Giera, S., Young, A., Wysoker, A., Walker, A., Gergits, F., Segel, M., Nemesh, J., Saunders, A., Macosko, E., Franklin, R., Piao, X., McCarroll, S., Stevens, B. (2019). . Immunity 50, 253-271.

Hazelbaker DZ, Beccard A, Angelini G, Mazzucato P, Messana A, Lam D, Eggan K, Barrett LE. . Sci Rep. 2020 Jan 20;10(1):635.

Huang, Q., Chan, K., Tobey, I., Chan, Y., Poterba, T., Boutros, C., Balazs, A., Daneman, R., Bloom, J., Seed, C., Deverman, B. (2019). . PLOS One 101371.

Jin, X., Simmons, S. K., Guo, A., Shetty, A. S., Ko, M., Nguyen, L., Jokhi, V., Robinson, E., Oyler, P., Curry, N., Deangeli, G., Lodato, S., Levin, J. Z., Regev, A., Zhang, F., Arlotta, P. (2020). . Science. 370(6520):eaaz6063. 

Koopmans, F., van Nierop, P., Andres-Alonso, M., Byrnes, A., Cijsouw, T., Coba, M., Cornelisse, L., Farrell, R., Goldschmidt, H., Howrigan, D., et al. (2019). . Neuron 103, 217–234.

Krienen, F. M., Goldman, M., Zhang, Q., C. H. Del Rosario, R., Florio, M., Machold, R., Saunders, A., Levandowski, K., Zaniewski, H., Schuman, B., Wu, C., Lutservitz, A., Mullally, C. D., Reed, N., Bien, E., Bortolin, L., Fernandez-Otero, M., Lin, J. D., Wysoker, A., Nemesh, J., Kulp, D., Burns, M., Tkachev, V., Smith, R., Walsh, C. A., Dimidschstein, J., Rudy, B., Kean, L. S., Berretta, S., Fishell, G., Feng, G., McCarroll, S. A. (2020). . Nature. 586(7828):262-269. doi: 10.1038/s41586-020-2781-z.

Liu, J., Gao, C., Sodicoff, J., Kozareva, V., Macosko, E. Z., Welch, J. D. (2020). . Nature Protocols.15(11):3632-3662.

Pintacuda, G., Lassen, F. H., Hsu, Y. H., Kim, A., Martín, J. M., Malolepsza, E., Lim, J. K., Fornelos, N., Eggan, K. C., & Lage, K. (2021). . Nature communications, 12(1), 2580. 

Pintacuda, G., Martín, J. M., & Eggan, K. C. (2021).. Molecular autism, 12(1), 10. 

Rodriques, S., Stickels, R., Goeva, A., Martin, C., Murray, E., Vanderburg, C., Welch, J., Chen, L. M., Chen, F., Macosko, E. (2019). . Science 363, 1463–1467.

Smith, E. J., Farshim, P. P., Flomen, R., Jones, S. T., McAteer, S. J., Deverman, B. E., Gradinaru, V., & Bates, G. P. (2021). . Brain communications, 3(2), fcab105. 

Stickels, R. R., Murray, E., Kumar, P., Li, J., Marshall, J. L., Di Bella, D. J., Arlotta, P., Macosko, E. Z., & Chen, F. (2021). . Nature biotechnology, 39(3), 313–319. 

Tomov, M. L., O'Neil, A., Abbasi, H. S., Cimini, B. A., Carpenter, A. E., Rubin, L. L., & Bathe, M. (2021).. Communications biology, 4(1), 786. 

Velasco, S., Kedaigle, A. J., Simmons, S., Nash, A., Rocha, M., Quadrato, G., Paulsen, B., Nguyen, L., Adiconis, X., Regev, A., Levin, J.Z., Arlotta, P. (2019). . Nature 570, 523–527.

Velasco, S., Paulsen, B., Arlotta, P. (2020) . Annual Review of Neuroscience. 43:375-389.

Vormstein-Schneider D, Lin JD, Pelkey KA, Chittajallu R, Guo B, Arias-Garcia MA, Allaway K, Sakopoulos S, Schneider G, Stevenson O, Vergara J, Sharma J, Zhang Q, Franken TP, Smith J, Ibrahim LA, M Astro KJ, Sabri E, Huang S, Favuzzi E, Burbridge T, Xu Q, Guo L, Vogel I, Sanchez V, Saldi GA, Gorissen BL, Yuan X, Zaghloul KA, Devinsky O, Sabatini BL, Batista-Brito R, Reynolds J, Feng G, Fu Z, McBain CJ, Fishell G, Dimidschstein J. . Nat Neurosci. 2020 Aug 17. 

Welch, J., Kozareva, V., Ferreira, A., Vanderburg, C., Martin, C., and Macosko, E. (2019). . Cell 177, 1873–1887.

Ximerakis, M., Lipnick, S., Innes, B. T., Simmons, S. K., Adiconis, X., Dionne, D., Mayweather, B., Nguyen, L., Niziolek, Z., Ozek, C., Butty, V., Isserlin, R., Buchanan, S., Levine, S., Regev, A., Bader, G., Levin, J., Rubin, L. (2019), , Nat Neurosci 22:1696-1708

Hazelbaker, D. Z., Beccard, A., Mazzucato, P., Angelini, G., Messana, A., Lam, D., Eggan, K., and Barrett, L. E. (2019). . bioRxiv 603951

Insights into disease mechanisms:

Amal, H., Barak, B., Bhat, V., Gong, G., Joughin, B. A., Wang, X., Wishnok, J. S., Feng, G., Tannenbaum, S. R. (2020). . Molecular Psychiatry 25(8), 1835-1848.

Barak, B., Zhang, Z., Liu, Y., Nir, A., Trangle, S., Ennis, M., Levandowski, K., Wang, D., Quast, K., Boulting, G., et al. (2019). . Nature Neuroscience 22, 700–708.

Chen Q, Deister CA, Gao X, Guo B, Lynn-Jones T, Chen N, Wells MF, Liu R, Goard MJ, Dimidschstein J, Feng S, Shi Y, Liao W, Lu Z, Fishell G, Moore CI, Feng G. (2020) . Nat Neurosci. 23:520-532

Du, J., Simmons, S., Brunklaus, A., Adiconis, X., Hession, C., Fu, Z., Li, Y., Shema, R., Møller, R., Barak, B., Feng, G., Meisler, M., Sanders, S., Lerche, H., Campbell, A., McCarroll, S., Levin, J., Lal, D. (2019). . Eur J Paediatr Neurol.  Dec 28 2019 [Epub ahead of print]

Guo, B., Chen, J., Chen, Q., Ren, K., Feng, D., Mao, H., Yao, H., Yang, J., Liu, H., Liu, Y., et al. (2019). . Nature Neuroscience 22, 1223–1234.

Krienen FM, Goldman M, Zhang Q, C H Del Rosario R, Florio M, Machold R, Saunders A, Levandowski K, Zaniewski H, Schuman B, Wu C, Lutservitz A, Mullally CD, Reed N, Bien E, Bortolin L, Fernandez-Otero M, Lin JD, Wysoker A, Nemesh J, Kulp D, Burns M, Tkachev V, Smith R, Walsh CA, Dimidschstein J, Rudy B, S Kean L, Berretta S, Fishell G, Feng G, McCarroll SA. . Nature. 2020 Oct;586(7828):262-269. 

Mealer, R. G., Jenkins, B. G., Chen, C. Y., Daly, M. J., Ge, T., Lehoux, S., Marquardt, T., Palmer, C. D., Park, J. H., Parsons, P. J., Sackstein, R., Williams, S. E., Cumming,s R. D., Scolnick, E. M., Smoller, J.W. (2020). . Scientific Reports 10(1), 13162. 

Mealer, R. G., Williams, S. E., Daly, M. J., Scolnick, E. M., Cummings, R. D., Smoller, J. W. (2020). . Molecular Psychiatry 25(12), 3129-3139. 

Nakajima, M., Schmitt, L., Halassa, M. (2019). . Neuron 103, 445–458.

Nakajima, M., Schmitt, L., Feng, G., Halassa, M. (2019). . Neuron 104, 488–500.

Roy, D. S., Zhang, Y., Aida, T., Choi, S., Chen, Q., Hou, Y., Lea, N. E., Skaggs, K. M., Quay, J. C., Liew, M., Maisano, H., Le, V., Jones, C., Xu, J., Kong, D., Sullivan, H. A., Saunders, A., McCarroll, S. A., Wickersham, I. R., & Feng, G. (2021). Neuron, S0896-6273(21)00420-7. Advance online publication. 

Scott-Hewitt, N., Perrucci, F., Morini, R., Erreni, M., Mahoney, M., Witkowska, A., Carey, A., Faggiani, E., Schuetz, L. T., Mason, S., Tamborini, M., Bizzotto, M., Passoni, L., Filipello, F., Jahn, R., Stevens, B., Matteoli, M. (2020). . EMBO Journal. 39(16):e105380. 

Wallace J, Lord J, Dissing-Olesen L, Stevens B, Murthy VN. . Elife. 2020 Mar 9;9:e50531. 

Yang, S. M., Michel, K., Jokhi, V., Nedivi, E., Arlotta, P. (2020). . Science 370. (6523):eabd2109. doi: 10.1126/science.abd2109. PMID: 33335032.

Yilmaz, M., Yalcin, E., Presumey, J., Aw, E., Ma, M., Whelan, C. W., Stevens, B., McCarroll, S. A., Carroll, M. C. (2021). . Nature Neuroscience.  24(2), 214–224. print.

Zhou, Y., Sharma, J., Ke, Q., Landman, R., Yuan, J., Chen, H., Hayden, D., Fisher, J., Jiang, M., Menegas, W., et al. (2019). . Nature 570, 326–331.

Zonouzi, M., Berger, D., Jokhi, V., Kedaigle, A., Lichtman, J., and Arlotta, P. (2019). . Cell Reports 27, 2799–2808.

Kamitaki, N., Sekar, A., Handsaker, R., de Rivera, H., Tooley, K., Morris, D., Taylor, K., Whelan, C., Tombleson, P., Olde Loohuis, L.;Schizophrenia Working Group of the Psychiatric Genomics Consortium, Boehnke, M., Kimberly, R., Kaufman, K., Harley, J., Langefeld, C.,  Seidman, C., Pato, M., Pato, C., Ophoff, R.,  Graham, R.,  Criswell, L., Vyse, T., McCarroll, S. (2019). . bioRxiv 761718

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Selected preprints:

Di Bella, D. J., Habibi, E., Yang, S.-M., Stickels, R. R., Brown, J., Yadollahpour, P., Chen, F., Macosko, E. Z., Regev, A., & Arlotta, P. (2020). . bioRxiv 2020.07.02.185439

Mitchell, J. M., Nemesh, J., Ghosh, S., Handsaker, R. E., Mello, C. J., Meyer, D., Raghunathan, K., de Rivera, H., Tegtmeyer, M., Hawes, D., Neumann, A., Nehme, R., Eggan, K., & McCarroll, S. A. (2020). bioRxiv 2020.06.29.174383

Paulsen, B., Velasco, S., Kedaigle, A. J., Pigoni, M., Quadrato, G., Deo, A., Adiconis, X., Uzquiano, A., Kim, K., Simmons, S. K., Tsafou, K., Albanese, A., Sartore, R., Abbate, C., Tucewicz, A., Smith, S., Chung, K., Lage, K., Regev, A., … Arlotta, P. (2020). bioRxiv 2020.11.10.376509

Pintacuda, G., Lassen, F. H., Hsu, Y.-H. H., Kim, A., Martín, J. M., Malolepsza, E., Lim, J. K., Fornelos, N., Eggan, K. C., & Lage, K. (2020). . bioRxiv 2020.05.04.076034

Clinical and Therapeutics

Draffin, J. E., Sánchez-Castillo, C., Fernández-Rodrigo, A., Sánchez-Sáez, X., Ávila, J., Wagner, F. F., Esteban, J. A. (2021). . EMBO Journal. 40(2):e105513. 

Feseha, S., Timic Stamenic, T., Wallace, D., Tamag, C., Yang, L., Pan, J. Q., Todorovic, S. M. (2020). . Scientific Reports.10(1):21510. 

Ghoshal, A., Uygun, D., Yang, L., McNally, J., Lopez-Huerta, V., Arias-Garcia, M., Baez-Nieto, D., Allen, A., Fitzgerald, M., Choi, S., et al. (2020). . Translational Psychiatry 10:29.

Guo, S-M., Veneziano, R., Gordonov, S., Li, L., Danielson, E., Perez de Arce, K., Park, D., Kulesa, A., Wamhoff, E-C., Blainey, P., et al. (2019). . Nature Communications 10, 4337.

Heyne, H. O., Baez-Nieto, D., Iqbal, S., Palmer, D. S., Brunklaus, A., May, P.; Epi25 Collaborative, Johannesen, K. M., Lauxmann, S., Lemke, J. R., Møller, R. S., Pérez-Palma, E., Scholl, U. I., Syrbe, S., Lerche, H., Lal, D., Campbell, A. J., Wang, H. R., Pan, J., Daly, M. J. (2020). . Science Translational Medicine.

Hwang, H., Szucs, M. J., Ding, L. J., Allen, A., Ren, X., Haensgen, H., Gao, F., Rhim, H., Andrade, A., Pan, J. Q., Carr, S. A., Ahmad, R., & Xu, W. (2021).. Biological psychiatry, 89(3), 256–269.

Iqbal, S., Pérez-Palma, E., Jespersen, J. B., May, P., Hoksza, D., Heyne, H. O., Ahmed, S. S., Rifat, Z. T., Rahman, M. S., Lage, K., Palotie, A., Cottrell, J. R., Wagner, F. F., Daly, M. J., Campbell, A. J., Lal, D. (2020) . Proceedings of the National Academy of Sciences of the United States of America. 117(45):28201-28211. 

Madison, J. M., Duong, K., Vieux, E. F., Udeshi, N. D., Iqbal, S., Requadt, E., Fereshetian, S., Lewis, M. C., Gomes, A. S., Pierce, K. A., Platt, R. J., Zhang, F., Campbell, A. J., Lal, D., Wagner, F. F., Clish, C. B., Carr, S. A., Sheng, M., Scolnick, E. M., Cottrell, J. R. (2020) . iScience. 24(1):101935.

McCamphill, P.K., Stoppel, L.J., Senter, R.K., Lewis, M.C., Heynen, A.J., et al. (2020). . Science Translational Medicine 12, 544.

Reidenbach, A. G., Mesleh, M. F., Casalena, D., Vallabh, S. M., Dahlin, J. L., Leed, A. J., Chan, A. I., Usanov, D. L., Yehl, J. B., Lemke, C. T., Campbell, A. J., Shah, R. N., Shrestha, O. K., Sacher, J. R., Rangel, V. L., Moroco, J. A., Sathappa, M., Nonato, M. C., Nguyen, K. T., Wright, S. K., Liu, D. R., Wagner, F. F., Kaushik, V. K., Auld, D. S., Schreiber, S. L., Minikel, E. V. (2020) . Journal of Biological Chemistry. 295(39):13516-13531.

Sorek, M., Oweis, W., Nissim-Rafinia, M., Maman, M., Simon, S., Hession, C. C., Adiconis, X., Simmons, S. K., Sanjana, N. E., Shi, X., Lu, C., Pan, J. Q., Xu, X., Pouladi, M. A., Ellerby, L. M., Zhang, F., Levin, J. Z., & Meshorer, E. (2021). . Genome biology, 22(1), 73.