ӳ��ý

Publications

Enabling end-to-end secure federated learning in biomedical research on heterogeneous computing environments with APPFLx.

Hoang TH, Fuhrman J, Klarqvist M, et al. Enabling end-to-end secure federated learning in biomedical research on heterogeneous computing environments with APPFLx. Computational and structural biotechnology journal. 2025;28:29-39. doi:10.1016/j.csbj.2024.12.001

A multi-omics spatial framework for host-microbiome dissection within the intestinal tissue microenvironment.

Zhu B, Bai Y, Yeo YY, et al. A multi-omics spatial framework for host-microbiome dissection within the intestinal tissue microenvironment. Nature communications. 2025;16(1):1230. doi:10.1038/s41467-025-56237-7

Progressively differentiated T13 cells are stabilized by JunB to mediate allergen germinal center responses.

Chandrakar P, Nelson CS, Podestà MA, et al. Progressively differentiated T13 cells are stabilized by JunB to mediate allergen germinal center responses. Nature immunology. 2025. doi:10.1038/s41590-025-02077-y

Multi-omics approaches for understanding gene-environment interactions in noncommunicable diseases: techniques, translation, and equity issues.

Alemu R, Sharew NT, Arsano YY, et al. Multi-omics approaches for understanding gene-environment interactions in noncommunicable diseases: techniques, translation, and equity issues. Human genomics. 2025;19(1):8. doi:10.1186/s40246-025-00718-9

Ultrasound-Guided Nerve Hydrodissection for the Management of Carpal Tunnel Syndrome: A Systematic Review and Network Meta-Analysis.

Lee K, Park JM, Yoon SY, et al. Ultrasound-Guided Nerve Hydrodissection for the Management of Carpal Tunnel Syndrome: A Systematic Review and Network Meta-Analysis. Yonsei medical journal. 2025;66(2):111-120. doi:10.3349/ymj.2024.0089

Effects of coding variants in the glucokinase regulatory protein gene on hepatic glucose and triglyceride metabolism suggest a gene regulatory function of glucokinase.

Langer S, Jagdhuhn D, Waterstradt R, et al. Effects of coding variants in the glucokinase regulatory protein gene on hepatic glucose and triglyceride metabolism suggest a gene regulatory function of glucokinase. Metabolism: clinical and experimental. 2025:156150. doi:10.1016/j.metabol.2025.156150

Deep learning to decode sites of RNA translation in normal and cancerous tissues.

Clauwaert J, McVey Z, Gupta R, et al. Deep learning to decode sites of RNA translation in normal and cancerous tissues. Nature communications. 2025;16(1):1275. doi:10.1038/s41467-025-56543-0

Global outcomes and prognosis for relapsed/refractory mature T-cell and NK-cell lymphomas: results from the PETAL consortium.

Han JX, Koh MJ, Boussi L, et al. Global outcomes and prognosis for relapsed/refractory mature T-cell and NK-cell lymphomas: results from the PETAL consortium. Blood advances. 2025;9(3):583-602. doi:10.1182/bloodadvances.2024014674

A multi-modal transformer for cell type-agnostic regulatory predictions.

Javed N, Weingarten T, Sehanobish A, et al. A multi-modal transformer for cell type-agnostic regulatory predictions. Cell genomics. 2025:100762. doi:10.1016/j.xgen.2025.100762

Interferon-γ signaling in eosinophilic esophagitis affects epithelial barrier function and programmed cell death.

Lal M, Burk CM, Gautam R, et al. Interferon-γ signaling in eosinophilic esophagitis affects epithelial barrier function and programmed cell death. Cellular and molecular gastroenterology and hepatology. 2025:101466. doi:10.1016/j.jcmgh.2025.101466